Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.44■□□□□ 0.86
COL23A1Q86Y22 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
COL23A1Q86Y22 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 SLC25A24P2-201ENST00000415059 510 ntBASIC20.42■□□□□ 0.86
COL23A1Q86Y22 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 IGHJ2P-201ENST00000454480 60 ntBASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC106872.11-201ENST00000605838 421 ntBASIC20.42■□□□□ 0.86
COL23A1Q86Y22 AC244669.2-201ENST00000612320 853 ntBASIC20.42■□□□□ 0.86
COL23A1Q86Y22 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL23A1Q86Y22 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 FAM86LP-201ENST00000478302 853 ntBASIC20.41■□□□□ 0.86
COL23A1Q86Y22 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 PCDHB17P-201ENST00000539533 2393 ntBASIC20.41■□□□□ 0.86
COL23A1Q86Y22 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
COL23A1Q86Y22 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL23A1Q86Y22 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms