Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 FDX1P1-201ENST00000449115 551 ntBASIC14.79□□□□□ -0.04
LRRC28Q86X40 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AP002469.2-201ENST00000531724 424 ntBASIC14.79□□□□□ -0.04
LRRC28Q86X40 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.79□□□□□ -0.04
LRRC28Q86X40 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AC064862.7-201ENST00000604520 867 ntBASIC14.79□□□□□ -0.04
LRRC28Q86X40 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 AP000867.4-201ENST00000641616 219 ntBASIC14.79□□□□□ -0.04
LRRC28Q86X40 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LRRC28Q86X40 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LRRC28Q86X40 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SCARNA2-201ENST00000458748 420 ntBASIC14.78□□□□□ -0.04
LRRC28Q86X40 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LRRC28Q86X40 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LRRC28Q86X40 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRC28Q86X40 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.77□□□□□ -0.04
LRRC28Q86X40 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRC28Q86X40 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LRRC28Q86X40 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LRRC28Q86X40 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms