Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.02■□□□□ -0
SHFQ7M4L6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.02■□□□□ -0
SHFQ7M4L6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.02■□□□□ -0
SHFQ7M4L6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.02■□□□□ -0
SHFQ7M4L6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.02■□□□□ -0
SHFQ7M4L6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.02■□□□□ -0
SHFQ7M4L6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 GGT4P-201ENST00000623672 1708 ntBASIC15.02□□□□□ -0.01
SHFQ7M4L6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
SHFQ7M4L6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SHFQ7M4L6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 NUS1P2-201ENST00000417358 873 ntBASIC15.01□□□□□ -0.01
SHFQ7M4L6 ATP5G2P1-201ENST00000433580 426 ntBASIC15.01□□□□□ -0.01
SHFQ7M4L6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 AC091076.1-201ENST00000610741 619 ntBASIC15.01□□□□□ -0.01
SHFQ7M4L6 NPAP1P7-201ENST00000613027 823 ntBASIC15.01□□□□□ -0.01
SHFQ7M4L6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SHFQ7M4L6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SHFQ7M4L6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 HLA-DQB2-231ENST00000435145 2026 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 AC006449.6-201ENST00000612330 2296 ntBASIC15□□□□□ -0.01
SHFQ7M4L6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15□□□□□ -0.01
SHFQ7M4L6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SHFQ7M4L6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15□□□□□ -0.01
SHFQ7M4L6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SHFQ7M4L6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms