Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 AC105339.3-201ENST00000560043 636 ntBASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AL121912.1-201ENST00000603683 238 ntBASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC005593.1-201ENST00000624894 515 ntBASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AC008741.2-201ENST00000612792 3115 ntBASIC15.15■□□□□ 0.02
HIST3H2AQ7L7L0 AL353732.1-201ENST00000569618 1459 ntBASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 LINC02199-201ENST00000506655 2702 ntBASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 EMBP1-201ENST00000458200 901 ntBASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 REXO1L3P-201ENST00000622202 1288 ntBASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AC008735.5-201ENST00000623544 497 ntBASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HIST3H2AQ7L7L0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 AC004870.1-201ENST00000315132 882 ntBASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 KRT8P39-201ENST00000396270 1433 ntBASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HIST3H2AQ7L7L0 KRT18P27-201ENST00000427733 1299 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms