Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TUBA1AQ71U36 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AP005117.1-201ENST00000584346 1413 ntBASIC15.34■□□□□ 0.05
TUBA1AQ71U36 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AC004817.3-201ENST00000602957 2129 ntBASIC15.34■□□□□ 0.05
TUBA1AQ71U36 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AD001527.2-201ENST00000622994 785 ntBASIC15.34■□□□□ 0.05
TUBA1AQ71U36 TP73-AS1-207ENST00000624167 988 ntBASIC15.34■□□□□ 0.05
TUBA1AQ71U36 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.34■□□□□ 0.05
TUBA1AQ71U36 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.33■□□□□ 0.05
TUBA1AQ71U36 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
TUBA1AQ71U36 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 FGFR3P6-201ENST00000457012 610 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 BX005266.1-201ENST00000473402 457 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AC106795.1-205ENST00000512851 1056 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 IGHV3-52-201ENST00000519770 353 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TUBA1AQ71U36 AL355877.3-201ENST00000622820 899 ntBASIC15.33■□□□□ 0.04
TUBA1AQ71U36 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms