Protein–RNA interactions for Protein: Q68CL5

TPGS2, Tubulin polyglutamylase complex subunit 2, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2Q68CL5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 AC005622.1-201ENST00000636801 1703 ntBASIC17.18■□□□□ 0.34
TPGS2Q68CL5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPGS2Q68CL5 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.18■□□□□ 0.34
TPGS2Q68CL5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 AC135586.1-201ENST00000539323 574 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 CR383656.12-201ENST00000549567 513 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 AC005915.1-201ENST00000624912 2018 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 AC004840.1-201ENST00000636359 365 ntBASIC17.17■□□□□ 0.34
TPGS2Q68CL5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPGS2Q68CL5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AL353779.1-201ENST00000434793 351 ntBASIC17.16■□□□□ 0.34
TPGS2Q68CL5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AL512361.1-201ENST00000554200 418 ntBASIC17.16■□□□□ 0.34
TPGS2Q68CL5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 AL033527.5-202ENST00000641632 1098 ntBASIC17.16■□□□□ 0.34
TPGS2Q68CL5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TPGS2Q68CL5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 MIR4321-201ENST00000592276 80 ntBASIC17.15■□□□□ 0.34
TPGS2Q68CL5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TPGS2Q68CL5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms