Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
SCN1BQ07699 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SCN1BQ07699 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.81□□□□□ -0.04
SCN1BQ07699 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 AC096633.1-201ENST00000422446 749 ntBASIC14.81□□□□□ -0.04
SCN1BQ07699 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.81□□□□□ -0.04
SCN1BQ07699 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.81□□□□□ -0.04
SCN1BQ07699 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 AC023157.3-201ENST00000619086 2088 ntBASIC14.81□□□□□ -0.04
SCN1BQ07699 AC138035.3-201ENST00000622706 2791 ntBASIC14.81□□□□□ -0.04
SCN1BQ07699 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SCN1BQ07699 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SCN1BQ07699 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SCN1BQ07699 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SCN1BQ07699 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.8□□□□□ -0.04
SCN1BQ07699 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.8□□□□□ -0.04
SCN1BQ07699 AL645728.1-201ENST00000366221 2101 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SCN1BQ07699 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.8□□□□□ -0.04
SCN1BQ07699 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.8□□□□□ -0.04
SCN1BQ07699 AC090616.6-201ENST00000582640 721 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 AL592071.1-201ENST00000611956 408 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 CICP13-201ENST00000422015 2789 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 EGFEM1P-202ENST00000431685 1563 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 AP005117.1-202ENST00000581724 1908 ntBASIC14.8□□□□□ -0.04
SCN1BQ07699 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
SCN1BQ07699 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SCN1BQ07699 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCN1BQ07699 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SCN1BQ07699 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SCN1BQ07699 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms