Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 AC007326.2-201ENST00000624224 7579 ntBASIC15.19■□□□□ 0.02
CDC42P60953 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CDC42P60953 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC42P60953 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 LINC00982-205ENST00000420957 435 ntBASIC15.19■□□□□ 0.02
CDC42P60953 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.19■□□□□ 0.02
CDC42P60953 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.19■□□□□ 0.02
CDC42P60953 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.19■□□□□ 0.02
CDC42P60953 TERC-201ENST00000602385 541 ntBASIC15.19■□□□□ 0.02
CDC42P60953 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 AL031731.1-201ENST00000642131 2094 ntBASIC15.19■□□□□ 0.02
CDC42P60953 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CDC42P60953 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 TP73-AS1-210ENST00000637775 1455 ntBASIC15.19■□□□□ 0.02
CDC42P60953 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDC42P60953 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.19■□□□□ 0.02
CDC42P60953 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDC42P60953 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CDC42P60953 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.18■□□□□ 0.02
CDC42P60953 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDC42P60953 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CDC42P60953 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 SPDYE21P-201ENST00000413323 827 ntBASIC15.18■□□□□ 0.02
CDC42P60953 AK4P3-201ENST00000418260 669 ntBASIC15.18■□□□□ 0.02
CDC42P60953 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.18■□□□□ 0.02
CDC42P60953 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC42P60953 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.18■□□□□ 0.02
CDC42P60953 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.18■□□□□ 0.02
CDC42P60953 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 TOP3BP1-201ENST00000420768 1380 ntBASIC15.18■□□□□ 0.02
CDC42P60953 AC073347.1-201ENST00000421633 2643 ntBASIC15.18■□□□□ 0.02
CDC42P60953 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CDC42P60953 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDC42P60953 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 AL512652.2-201ENST00000625156 1716 ntBASIC15.17■□□□□ 0.02
CDC42P60953 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.17■□□□□ 0.02
CDC42P60953 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.17■□□□□ 0.02
CDC42P60953 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDC42P60953 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms