Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLDN2P57739 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 AL353705.2-201ENST00000428243 662 ntBASIC16.27■□□□□ 0.2
CLDN2P57739 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN2P57739 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.27■□□□□ 0.2
CLDN2P57739 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CLDN2P57739 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN2P57739 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN2P57739 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.27■□□□□ 0.19
CLDN2P57739 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.27■□□□□ 0.19
CLDN2P57739 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CLDN2P57739 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN2P57739 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 GPAA1P2-202ENST00000606848 1787 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN2P57739 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
CLDN2P57739 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CLDN2P57739 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN2P57739 TSSK5P-201ENST00000423978 907 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN2P57739 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN2P57739 AC008761.3-201ENST00000624803 892 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.26■□□□□ 0.19
CLDN2P57739 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN2P57739 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN2P57739 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN2P57739 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN2P57739 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN2P57739 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN2P57739 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
CLDN2P57739 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN2P57739 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms