Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 UXT-AS1-201ENST00000590504 1525 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 AL589702.1-201ENST00000641229 1509 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 AC023141.5-201ENST00000458585 616 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 AC009093.7-201ENST00000623853 1223 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 KRT18P32-201ENST00000424695 1287 ntBASIC18.04■□□□□ 0.48
NCKAP1LP55160 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 GPS2P2-201ENST00000430745 888 ntBASIC18.04■□□□□ 0.48
NCKAP1LP55160 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 SPTSSB-204ENST00000617024 1292 ntBASIC18.04■□□□□ 0.48
NCKAP1LP55160 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCKAP1LP55160 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCKAP1LP55160 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 AL592424.1-201ENST00000563624 1536 ntBASIC18.03■□□□□ 0.48
NCKAP1LP55160 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 REXO1L8P-201ENST00000604378 1897 ntBASIC18.03■□□□□ 0.48
NCKAP1LP55160 U82695.1-201ENST00000635752 1889 ntBASIC18.03■□□□□ 0.48
NCKAP1LP55160 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 AC098859.1-201ENST00000502915 1238 ntBASIC18.03■□□□□ 0.48
NCKAP1LP55160 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms