Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 AL391256.1-201ENST00000443260 1855 ntBASIC15.77■□□□□ 0.11
NR1H2P55055 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NR1H2P55055 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.77■□□□□ 0.11
NR1H2P55055 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NR1H2P55055 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.77■□□□□ 0.11
NR1H2P55055 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NR1H2P55055 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H2P55055 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H2P55055 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NR1H2P55055 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H2P55055 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
NR1H2P55055 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NR1H2P55055 POM121L3P-201ENST00000419331 1163 ntBASIC15.76■□□□□ 0.11
NR1H2P55055 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H2P55055 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.76■□□□□ 0.11
NR1H2P55055 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H2P55055 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 AL353801.3-201ENST00000609898 542 ntBASIC15.76■□□□□ 0.11
NR1H2P55055 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H2P55055 AC004263.2-201ENST00000617183 678 ntBASIC15.76■□□□□ 0.11
NR1H2P55055 NSUN5P1-202ENST00000421140 1535 ntBASIC15.76■□□□□ 0.11
NR1H2P55055 NSUN5P2-203ENST00000457352 1529 ntBASIC15.76■□□□□ 0.11
NR1H2P55055 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.76■□□□□ 0.11
NR1H2P55055 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NR1H2P55055 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NR1H2P55055 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
NR1H2P55055 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NR1H2P55055 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 AL160237.2-201ENST00000556165 472 ntBASIC15.75■□□□□ 0.11
NR1H2P55055 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NR1H2P55055 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
NR1H2P55055 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NR1H2P55055 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NR1H2P55055 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms