Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITGA8P53708 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ITGA8P53708 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ITGA8P53708 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.02■□□□□ 0.31
ITGA8P53708 LINC02447-202ENST00000501888 2146 ntBASIC17.02■□□□□ 0.31
ITGA8P53708 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
ITGA8P53708 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ITGA8P53708 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 AC112504.1-201ENST00000623415 1841 ntBASIC17.01■□□□□ 0.31
ITGA8P53708 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 DBET-201ENST00000630918 3363 ntBASIC17.01■□□□□ 0.31
ITGA8P53708 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.01■□□□□ 0.31
ITGA8P53708 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
ITGA8P53708 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.01■□□□□ 0.31
ITGA8P53708 MTDHP3-201ENST00000594186 672 ntBASIC17.01■□□□□ 0.31
ITGA8P53708 AC010654.1-201ENST00000615722 808 ntBASIC17.01■□□□□ 0.31
ITGA8P53708 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 AC004706.3-202ENST00000621574 984 ntBASIC17.01■□□□□ 0.31
ITGA8P53708 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ITGA8P53708 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ITGA8P53708 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17■□□□□ 0.31
ITGA8P53708 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17■□□□□ 0.31
ITGA8P53708 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17■□□□□ 0.31
ITGA8P53708 FOSL1P1-201ENST00000511041 816 ntBASIC17■□□□□ 0.31
ITGA8P53708 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17■□□□□ 0.31
ITGA8P53708 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17■□□□□ 0.31
ITGA8P53708 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17■□□□□ 0.31
ITGA8P53708 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17■□□□□ 0.31
ITGA8P53708 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ITGA8P53708 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.99■□□□□ 0.31
ITGA8P53708 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.99■□□□□ 0.31
ITGA8P53708 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.99■□□□□ 0.31
ITGA8P53708 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.99■□□□□ 0.31
ITGA8P53708 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.99■□□□□ 0.31
ITGA8P53708 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.99■□□□□ 0.31
ITGA8P53708 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ITGA8P53708 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms