Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.06■□□□□ 0.16
PDX1P52945 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.06■□□□□ 0.16
PDX1P52945 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
PDX1P52945 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDX1P52945 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDX1P52945 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 AC142381.1-201ENST00000426099 345 ntBASIC16.05■□□□□ 0.16
PDX1P52945 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.05■□□□□ 0.16
PDX1P52945 MPDU1-223ENST00000582151 728 ntBASIC16.05■□□□□ 0.16
PDX1P52945 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDX1P52945 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.05■□□□□ 0.16
PDX1P52945 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDX1P52945 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.04■□□□□ 0.16
PDX1P52945 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.04■□□□□ 0.16
PDX1P52945 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 AC106886.4-201ENST00000623557 2502 ntBASIC16.04■□□□□ 0.16
PDX1P52945 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.04■□□□□ 0.16
PDX1P52945 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.04■□□□□ 0.16
PDX1P52945 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.04■□□□□ 0.16
PDX1P52945 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.04■□□□□ 0.16
PDX1P52945 MIR4453-201ENST00000584019 89 ntBASIC16.04■□□□□ 0.16
PDX1P52945 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.04■□□□□ 0.16
PDX1P52945 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 AC131009.4-201ENST00000624048 1740 ntBASIC16.04■□□□□ 0.16
PDX1P52945 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDX1P52945 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 AC005915.1-201ENST00000624912 2018 ntBASIC16.03■□□□□ 0.16
PDX1P52945 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 AC004890.2-204ENST00000481968 304 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms