Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKBP51801 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKBP51801 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKBP51801 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCNKBP51801 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCNKBP51801 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLCNKBP51801 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCNKBP51801 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKBP51801 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLCNKBP51801 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKBP51801 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 AC004890.2-204ENST00000481968 304 ntBASIC17.57■□□□□ 0.4
CLCNKBP51801 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCNKBP51801 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKBP51801 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLCNKBP51801 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.57■□□□□ 0.4
CLCNKBP51801 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 GGT3P-204ENST00000453783 1664 ntBASIC17.57■□□□□ 0.4
CLCNKBP51801 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 AC106886.4-201ENST00000623557 2502 ntBASIC17.57■□□□□ 0.4
CLCNKBP51801 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLCNKBP51801 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLCNKBP51801 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
CLCNKBP51801 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKBP51801 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKBP51801 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CLCNKBP51801 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCNKBP51801 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 TSSK5P-201ENST00000423978 907 ntBASIC17.56■□□□□ 0.4
CLCNKBP51801 AC002472.2-201ENST00000442739 958 ntBASIC17.56■□□□□ 0.4
CLCNKBP51801 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 HLA-V-204ENST00000476601 1289 ntBASIC17.56■□□□□ 0.4
CLCNKBP51801 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKBP51801 RN7SL204P-201ENST00000582831 262 ntBASIC17.56■□□□□ 0.4
CLCNKBP51801 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.56■□□□□ 0.4
CLCNKBP51801 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.56■□□□□ 0.4
CLCNKBP51801 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.56■□□□□ 0.4
CLCNKBP51801 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLCNKBP51801 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLCNKBP51801 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKBP51801 AC061975.2-201ENST00000581722 295 ntBASIC17.55■□□□□ 0.4
CLCNKBP51801 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.55■□□□□ 0.4
CLCNKBP51801 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKBP51801 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.55■□□□□ 0.4
CLCNKBP51801 AL133215.2-201ENST00000609242 977 ntBASIC17.55■□□□□ 0.4
CLCNKBP51801 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLCNKBP51801 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLCNKBP51801 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLCNKBP51801 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms