Protein–RNA interactions for Protein: P50461

CSRP3, Cysteine and glycine-rich protein 3, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3P50461 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CSRP3P50461 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 AC009947.1-201ENST00000444350 727 ntBASIC16.34■□□□□ 0.21
CSRP3P50461 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.34■□□□□ 0.21
CSRP3P50461 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.34■□□□□ 0.21
CSRP3P50461 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CSRP3P50461 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CSRP3P50461 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.34■□□□□ 0.21
CSRP3P50461 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CSRP3P50461 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CSRP3P50461 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSRP3P50461 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CSRP3P50461 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSRP3P50461 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSRP3P50461 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.33■□□□□ 0.21
CSRP3P50461 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.33■□□□□ 0.21
CSRP3P50461 AC092384.3-202ENST00000564646 2873 ntBASIC16.33■□□□□ 0.21
CSRP3P50461 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSRP3P50461 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CSRP3P50461 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSRP3P50461 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CSRP3P50461 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.33■□□□□ 0.2
CSRP3P50461 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 RNU1-129P-201ENST00000384064 167 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.33■□□□□ 0.2
CSRP3P50461 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.33■□□□□ 0.2
CSRP3P50461 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.33■□□□□ 0.2
CSRP3P50461 AC108073.2-201ENST00000464002 357 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.33■□□□□ 0.2
CSRP3P50461 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.33■□□□□ 0.2
CSRP3P50461 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.33■□□□□ 0.2
CSRP3P50461 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 U1.21-201ENST00000580816 167 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 MIR4515-201ENST00000584082 81 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.33■□□□□ 0.2
CSRP3P50461 AC064836.3-201ENST00000607928 673 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CSRP3P50461 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.33■□□□□ 0.2
CSRP3P50461 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 AC012569.1-201ENST00000591191 1524 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 AC008677.1-201ENST00000519230 1561 ntBASIC16.33■□□□□ 0.2
CSRP3P50461 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CSRP3P50461 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
CSRP3P50461 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSRP3P50461 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 AIRN-201ENST00000601203 4374 ntBASIC16.32■□□□□ 0.2
CSRP3P50461 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 HMGA1P7-201ENST00000406908 502 ntBASIC16.32■□□□□ 0.2
CSRP3P50461 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.32■□□□□ 0.2
CSRP3P50461 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.32■□□□□ 0.2
CSRP3P50461 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.32■□□□□ 0.2
CSRP3P50461 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CSRP3P50461 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.32■□□□□ 0.2
CSRP3P50461 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CSRP3P50461 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSRP3P50461 AC104640.1-201ENST00000562617 2109 ntBASIC16.32■□□□□ 0.2
CSRP3P50461 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.32■□□□□ 0.2
CSRP3P50461 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms