Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.68■□□□□ 0.42
SSR1P43307 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSR1P43307 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SSR1P43307 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SSR1P43307 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 LAGE3P1-201ENST00000425356 484 ntBASIC17.67■□□□□ 0.42
SSR1P43307 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.67■□□□□ 0.42
SSR1P43307 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 AC087163.2-201ENST00000457299 853 ntBASIC17.67■□□□□ 0.42
SSR1P43307 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 UNC93B7-201ENST00000509439 705 ntBASIC17.67■□□□□ 0.42
SSR1P43307 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.67■□□□□ 0.42
SSR1P43307 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.67■□□□□ 0.42
SSR1P43307 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 AC006277.1-201ENST00000624348 1610 ntBASIC17.67■□□□□ 0.42
SSR1P43307 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.67■□□□□ 0.42
SSR1P43307 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.67■□□□□ 0.42
SSR1P43307 AC006449.5-201ENST00000610658 2098 ntBASIC17.67■□□□□ 0.42
SSR1P43307 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSR1P43307 TOP3BP1-201ENST00000420768 1380 ntBASIC17.66■□□□□ 0.42
SSR1P43307 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.66■□□□□ 0.42
SSR1P43307 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 PAWRP1-201ENST00000451083 565 ntBASIC17.66■□□□□ 0.42
SSR1P43307 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.66■□□□□ 0.42
SSR1P43307 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.66■□□□□ 0.42
SSR1P43307 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.66■□□□□ 0.42
SSR1P43307 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.66■□□□□ 0.42
SSR1P43307 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 AC006538.1-201ENST00000567905 1585 ntBASIC17.66■□□□□ 0.42
SSR1P43307 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.66■□□□□ 0.42
SSR1P43307 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSR1P43307 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSR1P43307 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms