Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SLC1A2P43004 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC1A2P43004 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 HLA-A-201ENST00000376802 1334 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 CRYGEP-201ENST00000412192 528 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 HCG4B-203ENST00000450128 991 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 AL662844.1-201ENST00000546340 181 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 AL031432.2-201ENST00000566714 459 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 AL928711.1-201ENST00000570165 459 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 AC010507.1-201ENST00000633895 436 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 AL645728.2-201ENST00000641974 660 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 AC046158.3-201ENST00000624947 2558 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SLC1A2P43004 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 AC132872.4-202ENST00000622924 2756 ntBASIC16.49■□□□□ 0.23
SLC1A2P43004 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC1A2P43004 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC1A2P43004 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A2P43004 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A2P43004 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A2P43004 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A2P43004 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SLC1A2P43004 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC1A2P43004 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A2P43004 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A2P43004 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A2P43004 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A2P43004 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A2P43004 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A2P43004 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A2P43004 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A2P43004 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A2P43004 AL603832.2-201ENST00000566195 2125 ntBASIC16.47■□□□□ 0.23
SLC1A2P43004 MIR3909-201ENST00000579518 119 ntBASIC16.47■□□□□ 0.23
SLC1A2P43004 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.47■□□□□ 0.23
SLC1A2P43004 AC021097.1-201ENST00000607902 574 ntBASIC16.47■□□□□ 0.23
SLC1A2P43004 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A2P43004 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A2P43004 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms