Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A3P43003 FAM185BP-201ENST00000443595 716 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 IGHV3-22-201ENST00000520721 359 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 UNC93B6-202ENST00000528242 690 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 MIR4751-201ENST00000578027 74 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A3P43003 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC1A3P43003 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC1A3P43003 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 SNX33P1-201ENST00000592116 1762 ntBASIC15.26■□□□□ 0.03
SLC1A3P43003 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SLC1A3P43003 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC1A3P43003 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A3P43003 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A3P43003 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 HYMAI-201ENST00000635591 3347 ntBASIC15.25■□□□□ 0.03
SLC1A3P43003 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
SLC1A3P43003 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A3P43003 AC009947.1-201ENST00000444350 727 ntBASIC15.25■□□□□ 0.03
SLC1A3P43003 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A3P43003 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A3P43003 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC1A3P43003 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A3P43003 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC1A3P43003 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC1A3P43003 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC1A3P43003 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A3P43003 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC1A3P43003 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC1A3P43003 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 MTHFR-217ENST00000641820 1569 ntBASIC15.24■□□□□ 0.03
SLC1A3P43003 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC1A3P43003 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC1A3P43003 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.24■□□□□ 0.03
SLC1A3P43003 VN2R19P-201ENST00000442399 1052 ntBASIC15.24■□□□□ 0.03
SLC1A3P43003 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms