Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.46■□□□□ 0.38
RFC1P35251 DOC2GP-204ENST00000639052 2548 ntBASIC17.46■□□□□ 0.38
RFC1P35251 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
RFC1P35251 FLJ16779-201ENST00000612722 7638 ntBASIC17.46■□□□□ 0.38
RFC1P35251 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 AC018695.7-201ENST00000624587 2492 ntBASIC17.45■□□□□ 0.38
RFC1P35251 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RFC1P35251 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC1P35251 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 AC106730.1-201ENST00000566722 1090 ntBASIC17.45■□□□□ 0.38
RFC1P35251 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
RFC1P35251 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.45■□□□□ 0.38
RFC1P35251 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RFC1P35251 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RFC1P35251 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.45■□□□□ 0.38
RFC1P35251 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RFC1P35251 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ZNF259P1-201ENST00000407656 1365 ntBASIC17.44■□□□□ 0.38
RFC1P35251 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RFC1P35251 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RFC1P35251 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC1P35251 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.44■□□□□ 0.38
RFC1P35251 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.44■□□□□ 0.38
RFC1P35251 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.44■□□□□ 0.38
RFC1P35251 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.44■□□□□ 0.38
RFC1P35251 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RFC1P35251 AC023141.13-201ENST00000604991 943 ntBASIC17.44■□□□□ 0.38
RFC1P35251 AC004877.2-201ENST00000623941 599 ntBASIC17.44■□□□□ 0.38
RFC1P35251 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 AC025580.3-201ENST00000617932 1424 ntBASIC17.44■□□□□ 0.38
RFC1P35251 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RFC1P35251 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RFC1P35251 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RFC1P35251 PCGF3-213ENST00000620529 1899 ntBASIC17.44■□□□□ 0.38
RFC1P35251 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.43■□□□□ 0.38
RFC1P35251 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.43■□□□□ 0.38
RFC1P35251 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RFC1P35251 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RFC1P35251 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms