Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LINC01144-201ENST00000626198 1710 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 IGHV3-62-201ENST00000520057 340 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 AL138918.1-201ENST00000568306 659 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 MIR4453-201ENST00000584019 89 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 AL008721.1-201ENST00000609964 604 ntBASIC17.05■□□□□ 0.32
HOXC13P31276 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
HOXC13P31276 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXC13P31276 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXC13P31276 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HOXC13P31276 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC13P31276 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC13P31276 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HOXC13P31276 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.04■□□□□ 0.32
HOXC13P31276 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HOXC13P31276 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HOXC13P31276 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXC13P31276 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 AC011270.2-201ENST00000624293 2550 ntBASIC17.03■□□□□ 0.32
HOXC13P31276 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 KRT18P34-201ENST00000488218 1270 ntBASIC17.03■□□□□ 0.32
HOXC13P31276 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.03■□□□□ 0.32
HOXC13P31276 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC13P31276 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HOXC13P31276 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.03■□□□□ 0.32
HOXC13P31276 ALOX12P2-203ENST00000570921 1945 ntBASIC17.03■□□□□ 0.32
HOXC13P31276 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.03■□□□□ 0.32
HOXC13P31276 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HOXC13P31276 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.03■□□□□ 0.32
HOXC13P31276 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC13P31276 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms