Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TNFSF4P23510 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TNFSF4P23510 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TNFSF4P23510 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TNFSF4P23510 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFSF4P23510 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFSF4P23510 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFSF4P23510 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.17□□□□□ -0.14
TNFSF4P23510 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TNFSF4P23510 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFSF4P23510 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFSF4P23510 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFSF4P23510 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TNFSF4P23510 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TNFSF4P23510 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 AL645728.1-201ENST00000366221 2101 ntBASIC14.16□□□□□ -0.14
TNFSF4P23510 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 CEND1P1-201ENST00000451006 455 ntBASIC14.16□□□□□ -0.14
TNFSF4P23510 RN7SL589P-201ENST00000481268 310 ntBASIC14.16□□□□□ -0.14
TNFSF4P23510 KRT18P34-201ENST00000488218 1270 ntBASIC14.16□□□□□ -0.14
TNFSF4P23510 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFSF4P23510 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TNFSF4P23510 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 AC006538.1-201ENST00000567905 1585 ntBASIC14.16□□□□□ -0.14
TNFSF4P23510 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TNFSF4P23510 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TNFSF4P23510 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFSF4P23510 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms