Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RPS9-211ENST00000484121 897 ntTSL 213.04□□□□□ -0.328e-11■■□□□ 13.5
RPS3P23396 RPS9-213ENST00000626547 476 ntTSL 2 BASIC12.4□□□□□ -0.428e-11■■□□□ 13.5
RPS3P23396 ELAC2-209ENST00000487229 2452 ntTSL 215.75■□□□□ 0.112e-6■■□□□ 13.5
RPS3P23396 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.3■□□□□ 0.522e-6■■□□□ 13.5
RPS3P23396 GPX4-209ENST00000593032 583 ntTSL 318.18■□□□□ 0.52e-6■■□□□ 13.5
RPS3P23396 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.422e-6■■□□□ 13.5
RPS3P23396 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.27■□□□□ 0.362e-6■■□□□ 13.5
RPS3P23396 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.262e-6■■□□□ 13.5
RPS3P23396 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.3■□□□□ 0.042e-6■■□□□ 13.5
RPS3P23396 RPS5-206ENST00000598807 970 ntTSL 216.73■□□□□ 0.276e-7■■□□□ 13.5
RPS3P23396 PIPOX-209ENST00000580383 580 ntTSL 319.28■□□□□ 0.683e-6■■□□□ 13.5
RPS3P23396 MIR4721-201ENST00000577590 89 ntBASIC10.88□□□□□ -0.673e-16■■□□□ 13.5
RPS3P23396 SND1-206ENST00000468166 552 ntTSL 47.92□□□□□ -1.148e-9■■□□□ 13.5
RPS3P23396 NFE2L1-212ENST00000581319 481 ntTSL 38.09□□□□□ -1.119e-10■■□□□ 13.5
RPS3P23396 CAPNS1-214ENST00000592483 431 ntTSL 523.19■■□□□ 1.33e-8■■□□□ 13.5
RPS3P23396 TGFBR3-211ENST00000533370 563 ntTSL 412.18□□□□□ -0.462e-16■■□□□ 13.4
RPS3P23396 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.08■□□□□ 0.811e-12■■□□□ 13.4
RPS3P23396 APLP2-219ENST00000533616 2041 ntTSL 218.88■□□□□ 0.611e-12■■□□□ 13.4
RPS3P23396 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.13■□□□□ 0.491e-12■■□□□ 13.4
RPS3P23396 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.211e-12■■□□□ 13.4
RPS3P23396 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.341e-12■■□□□ 13.4
RPS3P23396 ACAA1-218ENST00000489559 579 ntTSL 421.69■■□□□ 1.065e-16■■□□□ 13.4
RPS3P23396 FLNB-208ENST00000475487 541 ntTSL 216.96■□□□□ 0.313e-10■■□□□ 13.4
RPS3P23396 DYNLL1-210ENST00000552316 670 nt3.27□□□□□ -1.897e-13■■□□□ 13.4
RPS3P23396 AGRN-209ENST00000492947 690 ntTSL 216.41■□□□□ 0.229e-10■■□□□ 13.4
RPS3P23396 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.421e-6■■□□□ 13.4
RPS3P23396 PPP2CB-207ENST00000520500 603 ntTSL 45.79□□□□□ -1.481e-6■■□□□ 13.4
RPS3P23396 PPP2CB-202ENST00000518243 577 ntTSL 34.43□□□□□ -1.71e-6■■□□□ 13.4
RPS3P23396 APLP2-222ENST00000533860 1424 ntTSL 1 (best)15.52■□□□□ 0.081e-11■■□□□ 13.4
RPS3P23396 SUN2-207ENST00000433561 444 ntTSL 415.46■□□□□ 0.075e-8■■□□□ 13.4
RPS3P23396 SUN2-204ENST00000417332 545 ntTSL 414.55□□□□□ -0.085e-8■■□□□ 13.4
RPS3P23396 SUN2-209ENST00000439339 546 ntTSL 414.39□□□□□ -0.115e-8■■□□□ 13.4
RPS3P23396 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.032e-6■■□□□ 13.4
RPS3P23396 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.67□□□□□ -0.062e-6■■□□□ 13.4
RPS3P23396 DAP3-212ENST00000471214 1287 ntTSL 514.93□□□□□ -0.021e-6■■□□□ 13.4
RPS3P23396 DAP3-208ENST00000463575 550 ntTSL 54.28□□□□□ -1.721e-6■■□□□ 13.4
RPS3P23396 NAT14-203ENST00000588985 730 ntTSL 520.59■□□□□ 0.891e-7■■□□□ 13.4
RPS3P23396 MDK-207ENST00000441869 540 ntTSL 321.24■□□□□ 0.996e-15■■□□□ 13.4
RPS3P23396 CPE-204ENST00000511992 563 ntTSL 57.17□□□□□ -1.261e-19■■□□□ 13.4
RPS3P23396 CPE-202ENST00000431967 633 ntTSL 46.87□□□□□ -1.311e-19■■□□□ 13.4
RPS3P23396 FGFR1-217ENST00000470826 2281 ntTSL 1 (best)20.48■□□□□ 0.878e-8■■□□□ 13.4
RPS3P23396 SLC38A5-206ENST00000480105 894 ntTSL 212.75□□□□□ -0.372e-6■■□□□ 13.4
RPS3P23396 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.833e-7■■□□□ 13.4
RPS3P23396 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.03□□□□□ -1.123e-7■■□□□ 13.4
RPS3P23396 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.33e-7■■□□□ 13.4
RPS3P23396 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.125e-7■■□□□ 13.4
RPS3P23396 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.225e-7■■□□□ 13.4
RPS3P23396 SMARCD2-210ENST00000584400 1017 ntTSL 326.46■■□□□ 1.831e-10■■□□□ 13.4
RPS3P23396 SMARCD2-206ENST00000577990 449 ntTSL 321.65■■□□□ 1.061e-10■■□□□ 13.4
RPS3P23396 FADS2-213ENST00000523235 5073 ntTSL 214.37□□□□□ -0.117e-7■■□□□ 13.4
RPS3P23396 BCAM-209ENST00000590624 991 ntTSL 1 (best)19.11■□□□□ 0.651e-19■■□□□ 13.4
RPS3P23396 IGF2R-203ENST00000475584 597 ntTSL 314.82□□□□□ -0.047e-7■■□□□ 13.4
RPS3P23396 ACTG1-203ENST00000571691 761 ntTSL 312.52□□□□□ -0.417e-25■■□□□ 13.4
RPS3P23396 MST1-220ENST00000497359 1917 ntTSL 522.4■■□□□ 1.182e-19■■□□□ 13.4
RPS3P23396 MST1-204ENST00000479115 2285 ntTSL 521.22■□□□□ 0.992e-19■■□□□ 13.4
RPS3P23396 MST1-215ENST00000492329 2006 ntTSL 518.42■□□□□ 0.542e-19■■□□□ 13.4
RPS3P23396 MST1-208ENST00000484144 878 ntTSL 217.45■□□□□ 0.382e-19■■□□□ 13.4
RPS3P23396 MST1-221ENST00000498021 854 ntTSL 214.47□□□□□ -0.092e-19■■□□□ 13.4
RPS3P23396 MST1-207ENST00000481930 565 ntTSL 514.03□□□□□ -0.162e-19■■□□□ 13.4
RPS3P23396 MST1-217ENST00000493836 923 ntTSL 213.7□□□□□ -0.222e-19■■□□□ 13.4
RPS3P23396 MT-TF-201ENST00000387314 71 ntBASIC-0.67□□□□□ -2.529e-74■■□□□ 13.4
RPS3P23396 A2M-211ENST00000543436 600 ntTSL 510.93□□□□□ -0.664e-39■■□□□ 13.4
RPS3P23396 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.424e-6■■□□□ 13.4
RPS3P23396 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.655e-7■■□□□ 13.4
RPS3P23396 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.133e-13■■□□□ 13.4
RPS3P23396 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.41□□□□□ -0.263e-13■■□□□ 13.4
RPS3P23396 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91e-6■■□□□ 13.4
RPS3P23396 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.56■■□□□ 1.521e-6■■□□□ 13.4
RPS3P23396 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.02■■□□□ 1.281e-6■■□□□ 13.4
RPS3P23396 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.721e-6■■□□□ 13.4
RPS3P23396 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.591e-6■■□□□ 13.4
RPS3P23396 TXNRD2-209ENST00000474308 1854 ntTSL 218.48■□□□□ 0.551e-6■■□□□ 13.4
RPS3P23396 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.41e-6■■□□□ 13.4
RPS3P23396 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.95■□□□□ 0.141e-6■■□□□ 13.4
RPS3P23396 ERGIC3-215ENST00000486268 584 ntTSL 211.75□□□□□ -0.534e-7■■□□□ 13.4
RPS3P23396 ERGIC3-201ENST00000279052 2846 ntTSL 210.46□□□□□ -0.744e-7■■□□□ 13.4
RPS3P23396 ERGIC3-204ENST00000411577 601 ntTSL 29.02□□□□□ -0.974e-7■■□□□ 13.4
RPS3P23396 C3-217ENST00000602053 621 ntTSL 27.87□□□□□ -1.157e-38■■□□□ 13.4
RPS3P23396 PYCR1-209ENST00000579698 572 ntTSL 418.17■□□□□ 0.58e-8■■□□□ 13.4
RPS3P23396 HM13-206ENST00000460389 1075 ntTSL 513.57□□□□□ -0.245e-11■■□□□ 13.4
RPS3P23396 PON2-206ENST00000460873 569 ntTSL 43.77□□□□□ -1.814e-16■■□□□ 13.4
RPS3P23396 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC12.93□□□□□ -0.342e-7■■□□□ 13.4
RPS3P23396 SKIV2L2-205ENST00000504997 500 ntTSL 45.64□□□□□ -1.513e-6■■□□□ 13.4
RPS3P23396 AKR1C3-203ENST00000470862 996 ntTSL 58.47□□□□□ -1.053e-7■■□□□ 13.4
RPS3P23396 AKR1C3-205ENST00000480822 795 ntTSL 57.51□□□□□ -1.213e-7■■□□□ 13.4
RPS3P23396 HNRNPK-211ENST00000493362 868 ntTSL 24.87□□□□□ -1.631e-11■■□□□ 13.4
RPS3P23396 AKR1C3-204ENST00000480697 1026 ntTSL 1 (best)4.75□□□□□ -1.653e-7■■□□□ 13.4
RPS3P23396 FDPS-216ENST00000491013 912 ntTSL 514.3□□□□□ -0.121e-7■■□□□ 13.4
RPS3P23396 FDPS-211ENST00000477057 741 ntTSL 212.33□□□□□ -0.441e-7■■□□□ 13.4
RPS3P23396 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.89□□□□□ -0.196e-7■■□□□ 13.4
RPS3P23396 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.9□□□□□ -0.346e-7■■□□□ 13.4
RPS3P23396 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.89□□□□□ -0.356e-7■■□□□ 13.4
RPS3P23396 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.696e-7■■□□□ 13.4
RPS3P23396 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.786e-7■■□□□ 13.4
RPS3P23396 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.142e-14■■□□□ 13.4
RPS3P23396 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.162e-14■■□□□ 13.4
RPS3P23396 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.332e-14■■□□□ 13.4
RPS3P23396 CLU-210ENST00000522238 791 ntTSL 311.42□□□□□ -0.585e-53■■□□□ 13.4
RPS3P23396 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.751e-7■■□□□ 13.4
RPS3P23396 RAD23A-208ENST00000591499 1350 ntTSL 218.48■□□□□ 0.551e-7■■□□□ 13.4
Retrieved 100 of 24,271 protein–RNA pairs in 179.7 ms