RNA–Protein interactions for RNA: ENST00000470826.5

FGFR1-217, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 2,281 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-217ENST00000470826 NISCHQ9Y2I1 1504 aa43.23■■■■■ 4.51
FGFR1-217ENST00000470826 SHROOM4Q9ULL8 1493 aa36.77■■■■□ 3.48
FGFR1-217ENST00000470826 CCDC180Q9P1Z9 1646 aa36.75■■■■□ 3.47
FGFR1-217ENST00000470826 ZCCHC6Q5VYS8 1495 aaKnown RBP36.63■■■■□ 3.45
FGFR1-217ENST00000470826 SUPT5HO00267 1087 aaKnown RBP36.11■■■■□ 3.37
FGFR1-217ENST00000470826 DCAF1Q9Y4B6 1507 aa35.55■■■■□ 3.28
FGFR1-217ENST00000470826 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
FGFR1-217ENST00000470826 CHIC1Q5VXU3 224 aa35.3■■■■□ 3.24
FGFR1-217ENST00000470826 MYO15BQ96JP2 1530 aa35.24■■■■□ 3.23
FGFR1-217ENST00000470826 ABCC9O60706 1549 aa34.59■■■■□ 3.13
FGFR1-217ENST00000470826 HRCP23327 699 aa34.45■■■■□ 3.11
FGFR1-217ENST00000470826 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
FGFR1-217ENST00000470826 PCGF6Q9BYE7 350 aa34.26■■■■□ 3.07
FGFR1-217ENST00000470826 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
FGFR1-217ENST00000470826 LOC105371045A0A1W2PR82 267 aa34.19■■■■□ 3.06
FGFR1-217ENST00000470826 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
FGFR1-217ENST00000470826 NACADO15069 1562 aa33.9■■■■□ 3.02
FGFR1-217ENST00000470826 TRIM41Q8WV44 630 aa33.68■■■□□ 2.98
FGFR1-217ENST00000470826 CECR2Q9BXF3 1484 aa33.66■■■□□ 2.98
FGFR1-217ENST00000470826 TRIM26Q12899 539 aaPredicted RBP33.65■■■□□ 2.98
FGFR1-217ENST00000470826 PPARGC1BQ86YN6 1023 aaKnown RBP33.63■■■□□ 2.97
FGFR1-217ENST00000470826 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
FGFR1-217ENST00000470826 WIZO95785 1651 aa33.42■■■□□ 2.94
FGFR1-217ENST00000470826 FAM9AQ8IZU1 332 aaPredicted RBP33.33■■■□□ 2.93
FGFR1-217ENST00000470826 BAZ1AQ9NRL2 1556 aaPredicted RBP33.28■■■□□ 2.92
FGFR1-217ENST00000470826 EIF4G1Q04637 1599 aaKnown RBP33.14■■■□□ 2.9
FGFR1-217ENST00000470826 ZEB1P37275 1124 aaPredicted RBP32.98■■■□□ 2.87
FGFR1-217ENST00000470826 EHMT2Q96KQ7 1210 aa32.97■■■□□ 2.87
FGFR1-217ENST00000470826 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
FGFR1-217ENST00000470826 SMARCA4P51532 1647 aa32.91■■■□□ 2.86
FGFR1-217ENST00000470826 UNC13AQ9UPW8 1703 aa32.85■■■□□ 2.85
FGFR1-217ENST00000470826 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
FGFR1-217ENST00000470826 SMARCA2P51531 1590 aa32.76■■■□□ 2.83
FGFR1-217ENST00000470826 ABCC8Q09428 1581 aa32.7■■■□□ 2.82
FGFR1-217ENST00000470826 BICRAQ9NZM4 1560 aa32.43■■■□□ 2.78
FGFR1-217ENST00000470826 WRNQ14191 1432 aaPredicted RBP eCLIP32.42■■■□□ 2.78
FGFR1-217ENST00000470826 SOGA1O94964 1423 aa32.41■■■□□ 2.78
FGFR1-217ENST00000470826 CEP162Q5TB80 1403 aa32.35■■■□□ 2.77
FGFR1-217ENST00000470826 EEA1Q15075 1411 aa32.33■■■□□ 2.77
FGFR1-217ENST00000470826 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
FGFR1-217ENST00000470826 TNIKQ9UKE5 1360 aa32.31■■■□□ 2.76
FGFR1-217ENST00000470826 PABPN1Q86U42 306 aaKnown RBP eCLIP32.26■■■□□ 2.75
FGFR1-217ENST00000470826 RUSC2Q8N2Y8 1516 aa32.25■■■□□ 2.75
FGFR1-217ENST00000470826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.22■■■□□ 2.75
FGFR1-217ENST00000470826 CSRNP3Q8WYN3 585 aa32.22■■■□□ 2.75
FGFR1-217ENST00000470826 CCER1Q8TC90 406 aaPredicted RBP32.14■■■□□ 2.73
FGFR1-217ENST00000470826 GOLGA3Q08378 1498 aa32.09■■■□□ 2.73
FGFR1-217ENST00000470826 UBTFP17480 764 aaKnown RBP32.03■■■□□ 2.72
FGFR1-217ENST00000470826 SYNJ1O43426 1573 aa32.02■■■□□ 2.72
FGFR1-217ENST00000470826 ATAD2BQ9ULI0 1458 aa32■■■□□ 2.71
FGFR1-217ENST00000470826 TTBK1Q5TCY1 1321 aaPredicted RBP31.97■■■□□ 2.71
FGFR1-217ENST00000470826 KIF21BO75037 1637 aa31.92■■■□□ 2.7
FGFR1-217ENST00000470826 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
FGFR1-217ENST00000470826 BAZ1BQ9UIG0 1483 aaKnown RBP31.9■■■□□ 2.7
FGFR1-217ENST00000470826 SCAF1Q9H7N4 1312 aaKnown RBP31.79■■■□□ 2.68
FGFR1-217ENST00000470826 CLIP1P30622 1438 aa31.7■■■□□ 2.67
FGFR1-217ENST00000470826 TOP2BQ02880 1626 aa31.64■■■□□ 2.66
FGFR1-217ENST00000470826 RAPGEF2Q9Y4G8 1499 aa31.63■■■□□ 2.65
FGFR1-217ENST00000470826 VPS8Q8N3P4 1428 aa31.62■■■□□ 2.65
FGFR1-217ENST00000470826 DIEXFQ68CQ4 756 aaKnown RBP31.61■■■□□ 2.65
FGFR1-217ENST00000470826 BIVM-ERCC5R4GMW8 1640 aa31.54■■■□□ 2.64
FGFR1-217ENST00000470826 ACIN1Q9UKV3 1341 aaKnown RBP31.47■■■□□ 2.63
FGFR1-217ENST00000470826 HMGXB3Q12766 1538 aa31.4■■■□□ 2.62
FGFR1-217ENST00000470826 NEUROD1Q13562 356 aa31.4■■■□□ 2.62
FGFR1-217ENST00000470826 HNRNPUL2Q1KMD3 747 aaKnown RBP31.39■■■□□ 2.62
FGFR1-217ENST00000470826 ERICH3Q5RHP9 1530 aa31.38■■■□□ 2.61
FGFR1-217ENST00000470826 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
FGFR1-217ENST00000470826 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
FGFR1-217ENST00000470826 PRXQ9BXM0 1461 aa31.36■■■□□ 2.61
FGFR1-217ENST00000470826 APLP2Q06481 763 aa31.34■■■□□ 2.61
FGFR1-217ENST00000470826 PELP1Q8IZL8 1130 aaKnown RBP31.28■■■□□ 2.6
FGFR1-217ENST00000470826 CUX1P39880 1505 aa31.28■■■□□ 2.6
FGFR1-217ENST00000470826 RANGAP1P46060 587 aaPredicted RBP31.26■■■□□ 2.59
FGFR1-217ENST00000470826 CENPBP07199 599 aaPredicted RBP31.23■■■□□ 2.59
FGFR1-217ENST00000470826 ARAP1Q96P48 1450 aa31.23■■■□□ 2.59
FGFR1-217ENST00000470826 CFTRP13569 1480 aa31.16■■■□□ 2.58
FGFR1-217ENST00000470826 KIF27Q86VH2 1401 aa31.13■■■□□ 2.57
FGFR1-217ENST00000470826 GTF3C3Q9Y5Q9 886 aa31.07■■■□□ 2.56
FGFR1-217ENST00000470826 KANK4Q5T7N3 995 aaPredicted RBP31■■■□□ 2.55
FGFR1-217ENST00000470826 PRDM2Q13029 1718 aa30.96■■■□□ 2.55
FGFR1-217ENST00000470826 CLSPNQ9HAW4 1339 aa30.96■■■□□ 2.55
FGFR1-217ENST00000470826 RRBP1Q9P2E9 1410 aaKnown RBP30.93■■■□□ 2.54
FGFR1-217ENST00000470826 DHX57Q6P158 1386 aaKnown RBP30.93■■■□□ 2.54
FGFR1-217ENST00000470826 ARHGAP35Q9NRY4 1499 aa30.93■■■□□ 2.54
FGFR1-217ENST00000470826 MIER1Q8N108 512 aa30.92■■■□□ 2.54
FGFR1-217ENST00000470826 CUX2O14529 1486 aa30.81■■■□□ 2.52
FGFR1-217ENST00000470826 IGF1RP08069 1367 aa30.79■■■□□ 2.52
FGFR1-217ENST00000470826 YTHDC1Q96MU7 727 aaKnown RBP30.78■■■□□ 2.52
FGFR1-217ENST00000470826 CADPSQ9ULU8 1353 aa30.74■■■□□ 2.51
FGFR1-217ENST00000470826 CCNB3Q8WWL7 1395 aa30.74■■■□□ 2.51
FGFR1-217ENST00000470826 FGD5Q6ZNL6 1462 aa30.67■■■□□ 2.5
FGFR1-217ENST00000470826 MAP3K1Q13233 1512 aa30.65■■■□□ 2.5
FGFR1-217ENST00000470826 CARMIL1Q5VZK9 1371 aa30.64■■■□□ 2.49
FGFR1-217ENST00000470826 TIAM1Q13009 1591 aa30.63■■■□□ 2.49
FGFR1-217ENST00000470826 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
FGFR1-217ENST00000470826 ITGAEP38570 1179 aa30.47■■■□□ 2.47
FGFR1-217ENST00000470826 RAB3GAP2Q9H2M9 1393 aa30.47■■■□□ 2.47
FGFR1-217ENST00000470826 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
FGFR1-217ENST00000470826 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.46
FGFR1-217ENST00000470826 MAPKBP1O60336 1514 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms