Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.22□□□□□ -0.13
CCL1P22362 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 MIR4751-201ENST00000578027 74 ntBASIC14.22□□□□□ -0.13
CCL1P22362 MIR7706-201ENST00000613747 67 ntBASIC14.22□□□□□ -0.13
CCL1P22362 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL1P22362 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.21□□□□□ -0.13
CCL1P22362 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL1P22362 VN2R19P-201ENST00000442399 1052 ntBASIC14.21□□□□□ -0.13
CCL1P22362 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL1P22362 AC079781.3-201ENST00000449110 356 ntBASIC14.21□□□□□ -0.13
CCL1P22362 AC092910.1-201ENST00000482027 1129 ntBASIC14.21□□□□□ -0.13
CCL1P22362 AC109635.5-201ENST00000533593 962 ntBASIC14.21□□□□□ -0.13
CCL1P22362 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.21□□□□□ -0.13
CCL1P22362 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.21□□□□□ -0.13
CCL1P22362 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL1P22362 AL773604.1-201ENST00000617417 272 ntBASIC14.21□□□□□ -0.13
CCL1P22362 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.21□□□□□ -0.13
CCL1P22362 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.21□□□□□ -0.13
CCL1P22362 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCL1P22362 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
CCL1P22362 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CCL1P22362 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL1P22362 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.21□□□□□ -0.14
CCL1P22362 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCL1P22362 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 AC092919.2-201ENST00000623631 1645 ntBASIC14.2□□□□□ -0.14
CCL1P22362 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL1P22362 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL1P22362 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL1P22362 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 IGLL3P-201ENST00000412472 434 ntBASIC14.2□□□□□ -0.14
CCL1P22362 FAAHP1-202ENST00000446499 1238 ntBASIC14.2□□□□□ -0.14
CCL1P22362 AL513480.1-201ENST00000451731 511 ntBASIC14.2□□□□□ -0.14
CCL1P22362 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL1P22362 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CCL1P22362 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL1P22362 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCL1P22362 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL1P22362 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms