Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
XRCC1P18887 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.54■□□□□ 0.24
XRCC1P18887 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
XRCC1P18887 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.54■□□□□ 0.24
XRCC1P18887 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC1P18887 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 AC024909.3-201ENST00000611513 2257 ntBASIC16.53■□□□□ 0.24
XRCC1P18887 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
XRCC1P18887 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
XRCC1P18887 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.53■□□□□ 0.24
XRCC1P18887 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.53■□□□□ 0.24
XRCC1P18887 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.53■□□□□ 0.24
XRCC1P18887 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC1P18887 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC1P18887 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC1P18887 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
XRCC1P18887 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
XRCC1P18887 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.52■□□□□ 0.24
XRCC1P18887 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.52■□□□□ 0.24
XRCC1P18887 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
XRCC1P18887 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.52■□□□□ 0.24
XRCC1P18887 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.52■□□□□ 0.24
XRCC1P18887 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
XRCC1P18887 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
XRCC1P18887 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.52■□□□□ 0.24
XRCC1P18887 AL691403.2-201ENST00000618460 490 ntBASIC16.52■□□□□ 0.24
XRCC1P18887 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
XRCC1P18887 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC1P18887 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
XRCC1P18887 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC1P18887 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.52■□□□□ 0.23
XRCC1P18887 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
XRCC1P18887 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
XRCC1P18887 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.52■□□□□ 0.23
XRCC1P18887 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.51■□□□□ 0.23
XRCC1P18887 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 HTR5BP-201ENST00000430851 1154 ntBASIC16.51■□□□□ 0.23
XRCC1P18887 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
XRCC1P18887 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.51■□□□□ 0.23
XRCC1P18887 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.51■□□□□ 0.23
XRCC1P18887 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
XRCC1P18887 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms