Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SYN1P17600 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 FXNP2-201ENST00000411625 547 ntBASIC17.79■□□□□ 0.44
SYN1P17600 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 CALR4P-201ENST00000431943 946 ntBASIC17.79■□□□□ 0.44
SYN1P17600 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.79■□□□□ 0.44
SYN1P17600 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.79■□□□□ 0.44
SYN1P17600 AP001889.1-201ENST00000525414 633 ntBASIC17.79■□□□□ 0.44
SYN1P17600 AP000812.2-201ENST00000538934 718 ntBASIC17.79■□□□□ 0.44
SYN1P17600 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.79■□□□□ 0.44
SYN1P17600 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.79■□□□□ 0.44
SYN1P17600 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.79■□□□□ 0.44
SYN1P17600 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SYN1P17600 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.79■□□□□ 0.44
SYN1P17600 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYN1P17600 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
SYN1P17600 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SYN1P17600 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.78■□□□□ 0.44
SYN1P17600 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 SLC25A1P3-201ENST00000395415 828 ntBASIC17.78■□□□□ 0.44
SYN1P17600 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 AC026954.1-201ENST00000429771 1293 ntBASIC17.78■□□□□ 0.44
SYN1P17600 MPRIPP1-201ENST00000452433 1089 ntBASIC17.78■□□□□ 0.44
SYN1P17600 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.78■□□□□ 0.44
SYN1P17600 FTH1P14-201ENST00000482930 551 ntBASIC17.78■□□□□ 0.44
SYN1P17600 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.78■□□□□ 0.44
SYN1P17600 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 AC068587.3-201ENST00000526613 355 ntBASIC17.78■□□□□ 0.44
SYN1P17600 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.78■□□□□ 0.44
SYN1P17600 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.78■□□□□ 0.44
SYN1P17600 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.78■□□□□ 0.44
SYN1P17600 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.78■□□□□ 0.44
SYN1P17600 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYN1P17600 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
SYN1P17600 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.78■□□□□ 0.44
SYN1P17600 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.78■□□□□ 0.44
SYN1P17600 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYN1P17600 AC135050.7-201ENST00000624508 2218 ntBASIC17.78■□□□□ 0.44
SYN1P17600 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.77■□□□□ 0.44
SYN1P17600 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SYN1P17600 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SYN1P17600 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SYN1P17600 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.77■□□□□ 0.44
SYN1P17600 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.77■□□□□ 0.44
SYN1P17600 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SYN1P17600 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYN1P17600 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms