Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RARBP10826 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RARBP10826 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.43■□□□□ 0.54
RARBP10826 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RARBP10826 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RARBP10826 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RARBP10826 LINC02012-201ENST00000608206 1725 ntBASIC18.43■□□□□ 0.54
RARBP10826 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RARBP10826 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RARBP10826 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
RARBP10826 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RARBP10826 AL023806.1-201ENST00000603994 1649 ntBASIC18.42■□□□□ 0.54
RARBP10826 KRT8P39-201ENST00000396270 1433 ntBASIC18.42■□□□□ 0.54
RARBP10826 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.42■□□□□ 0.54
RARBP10826 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.42■□□□□ 0.54
RARBP10826 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.42■□□□□ 0.54
RARBP10826 ACA64.2-201ENST00000459014 129 ntBASIC18.42■□□□□ 0.54
RARBP10826 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.42■□□□□ 0.54
RARBP10826 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.42■□□□□ 0.54
RARBP10826 MIR6805-201ENST00000615055 62 ntBASIC18.42■□□□□ 0.54
RARBP10826 MIR6799-201ENST00000620297 69 ntBASIC18.42■□□□□ 0.54
RARBP10826 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.42■□□□□ 0.54
RARBP10826 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RARBP10826 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RARBP10826 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.41■□□□□ 0.54
RARBP10826 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.41■□□□□ 0.54
RARBP10826 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RARBP10826 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.41■□□□□ 0.54
RARBP10826 AC055876.2-201ENST00000531834 546 ntBASIC18.41■□□□□ 0.54
RARBP10826 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 AC024267.1-201ENST00000582320 895 ntBASIC18.41■□□□□ 0.54
RARBP10826 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.41■□□□□ 0.54
RARBP10826 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.41■□□□□ 0.54
RARBP10826 AC004790.1-201ENST00000612686 536 ntBASIC18.41■□□□□ 0.54
RARBP10826 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.41■□□□□ 0.54
RARBP10826 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RARBP10826 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.41■□□□□ 0.54
RARBP10826 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RARBP10826 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.41■□□□□ 0.54
RARBP10826 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RARBP10826 SLC7A15P-201ENST00000424028 1363 ntBASIC18.41■□□□□ 0.54
RARBP10826 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RARBP10826 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RARBP10826 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RARBP10826 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARBP10826 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
RARBP10826 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARBP10826 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARBP10826 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RARBP10826 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARBP10826 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RARBP10826 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.4■□□□□ 0.54
RARBP10826 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.4■□□□□ 0.54
RARBP10826 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.4■□□□□ 0.54
RARBP10826 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms