Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CD28P10747 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.94□□□□□ -0.34
CD28P10747 TSPY16P-201ENST00000449843 468 ntBASIC12.94□□□□□ -0.34
CD28P10747 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 AL512638.1-201ENST00000457493 794 ntBASIC12.94□□□□□ -0.34
CD28P10747 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.94□□□□□ -0.34
CD28P10747 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.94□□□□□ -0.34
CD28P10747 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.94□□□□□ -0.34
CD28P10747 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 LINC00895-201ENST00000629028 1637 ntBASIC12.94□□□□□ -0.34
CD28P10747 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CD28P10747 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CD28P10747 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
CD28P10747 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.93□□□□□ -0.34
CD28P10747 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CD28P10747 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 AC236430.1-201ENST00000402231 743 ntBASIC12.93□□□□□ -0.34
CD28P10747 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.93□□□□□ -0.34
CD28P10747 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.93□□□□□ -0.34
CD28P10747 UGT1A2P-201ENST00000454886 866 ntBASIC12.93□□□□□ -0.34
CD28P10747 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.93□□□□□ -0.34
CD28P10747 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.93□□□□□ -0.34
CD28P10747 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CD28P10747 AC097493.3-201ENST00000509725 367 ntBASIC12.93□□□□□ -0.34
CD28P10747 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.93□□□□□ -0.34
CD28P10747 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.93□□□□□ -0.34
CD28P10747 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.93□□□□□ -0.34
CD28P10747 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.93□□□□□ -0.34
CD28P10747 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.93□□□□□ -0.34
CD28P10747 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CD28P10747 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 TUBB8P12-201ENST00000308911 1335 ntBASIC12.92□□□□□ -0.34
CD28P10747 TUBB7P-202ENST00000428444 1305 ntBASIC12.92□□□□□ -0.34
CD28P10747 TUBB8P7-204ENST00000567960 1332 ntBASIC12.92□□□□□ -0.34
CD28P10747 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 AC106820.2-201ENST00000563775 3264 ntBASIC12.92□□□□□ -0.34
CD28P10747 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms