Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPRFP10586 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPRFP10586 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTPRFP10586 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTPRFP10586 AC120498.9-201ENST00000339021 3867 ntBASIC18.66■□□□□ 0.58
PTPRFP10586 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PTPRFP10586 REXO1L6P-201ENST00000603433 1515 ntBASIC18.66■□□□□ 0.58
PTPRFP10586 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
PTPRFP10586 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTPRFP10586 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPRFP10586 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPRFP10586 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PTPRFP10586 AL033527.5-201ENST00000641382 801 ntBASIC18.65■□□□□ 0.58
PTPRFP10586 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRFP10586 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 AC006538.1-201ENST00000567905 1585 ntBASIC18.65■□□□□ 0.58
PTPRFP10586 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRFP10586 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRFP10586 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPRFP10586 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.64■□□□□ 0.58
PTPRFP10586 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.64■□□□□ 0.58
PTPRFP10586 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.64■□□□□ 0.58
PTPRFP10586 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTPRFP10586 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.64■□□□□ 0.58
PTPRFP10586 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.58
PTPRFP10586 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.64■□□□□ 0.58
PTPRFP10586 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.64■□□□□ 0.58
PTPRFP10586 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PTPRFP10586 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPRFP10586 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTPRFP10586 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 TOMM22P5-201ENST00000416399 439 ntBASIC18.64■□□□□ 0.57
PTPRFP10586 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPRFP10586 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRFP10586 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRFP10586 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPRFP10586 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPRFP10586 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRFP10586 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPRFP10586 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRFP10586 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPRFP10586 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRFP10586 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPRFP10586 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 FO393414.2-201ENST00000405153 598 ntBASIC18.63■□□□□ 0.57
PTPRFP10586 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPRFP10586 RN7SL399P-201ENST00000471648 279 ntBASIC18.63■□□□□ 0.57
PTPRFP10586 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRFP10586 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRFP10586 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRFP10586 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRFP10586 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
PTPRFP10586 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPRFP10586 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRFP10586 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms