Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RARAP10276 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RARAP10276 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RARAP10276 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
RARAP10276 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.39■□□□□ 0.37
RARAP10276 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.39■□□□□ 0.37
RARAP10276 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RARAP10276 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.39■□□□□ 0.37
RARAP10276 RNA5SP415-201ENST00000517246 115 ntBASIC17.39■□□□□ 0.37
RARAP10276 MIR4751-201ENST00000578027 74 ntBASIC17.39■□□□□ 0.37
RARAP10276 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.39■□□□□ 0.37
RARAP10276 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
RARAP10276 AP001350.2-201ENST00000625104 1094 ntBASIC17.39■□□□□ 0.37
RARAP10276 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.39■□□□□ 0.37
RARAP10276 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RARAP10276 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RARAP10276 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 CXCL1P1-201ENST00000502804 216 ntBASIC17.38■□□□□ 0.37
RARAP10276 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.38■□□□□ 0.37
RARAP10276 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.38■□□□□ 0.37
RARAP10276 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RARAP10276 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.38■□□□□ 0.37
RARAP10276 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RARAP10276 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RARAP10276 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARAP10276 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RARAP10276 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RARAP10276 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.37■□□□□ 0.37
RARAP10276 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 VN2R19P-201ENST00000442399 1052 ntBASIC17.37■□□□□ 0.37
RARAP10276 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.37■□□□□ 0.37
RARAP10276 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 AL603832.2-201ENST00000566195 2125 ntBASIC17.37■□□□□ 0.37
RARAP10276 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.37■□□□□ 0.37
RARAP10276 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RARAP10276 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RARAP10276 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.37■□□□□ 0.37
RARAP10276 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARAP10276 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms