Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.91■□□□□ 0.62
TPM2P07951 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.91■□□□□ 0.62
TPM2P07951 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TPM2P07951 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TPM2P07951 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TPM2P07951 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.91■□□□□ 0.62
TPM2P07951 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TPM2P07951 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 AL845331.1-201ENST00000424978 1190 ntBASIC18.9■□□□□ 0.62
TPM2P07951 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.9■□□□□ 0.62
TPM2P07951 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.9■□□□□ 0.62
TPM2P07951 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 AP002490.2-201ENST00000524791 560 ntBASIC18.9■□□□□ 0.62
TPM2P07951 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.9■□□□□ 0.62
TPM2P07951 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
TPM2P07951 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.9■□□□□ 0.62
TPM2P07951 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TPM2P07951 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
TPM2P07951 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
TPM2P07951 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM2P07951 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM2P07951 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TPM2P07951 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM2P07951 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TPM2P07951 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.89■□□□□ 0.61
TPM2P07951 CHCHD2P8-201ENST00000429873 447 ntBASIC18.89■□□□□ 0.61
TPM2P07951 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.89■□□□□ 0.61
TPM2P07951 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.89■□□□□ 0.61
TPM2P07951 RN7SL850P-201ENST00000579959 291 ntBASIC18.89■□□□□ 0.61
TPM2P07951 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.89■□□□□ 0.61
TPM2P07951 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TPM2P07951 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
TPM2P07951 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TPM2P07951 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TPM2P07951 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 AC126755.1-201ENST00000525846 6405 ntBASIC18.88■□□□□ 0.61
TPM2P07951 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TPM2P07951 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms