Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.85■□□□□ 0.45
CHRNA1P02708 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.85■□□□□ 0.45
CHRNA1P02708 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA1P02708 AL645608.8-201ENST00000606034 2086 ntBASIC17.85■□□□□ 0.45
CHRNA1P02708 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA1P02708 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA1P02708 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA1P02708 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA1P02708 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.84■□□□□ 0.45
CHRNA1P02708 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 AL391825.1-201ENST00000457671 1364 ntBASIC17.84■□□□□ 0.45
CHRNA1P02708 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.84■□□□□ 0.45
CHRNA1P02708 U91328.1-201ENST00000437528 223 ntBASIC17.84■□□□□ 0.45
CHRNA1P02708 SERBP1P3-201ENST00000459980 809 ntBASIC17.84■□□□□ 0.45
CHRNA1P02708 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.84■□□□□ 0.45
CHRNA1P02708 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHRNA1P02708 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHRNA1P02708 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA1P02708 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA1P02708 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA1P02708 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.83■□□□□ 0.45
CHRNA1P02708 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CHRNA1P02708 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.83■□□□□ 0.45
CHRNA1P02708 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CHRNA1P02708 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.83■□□□□ 0.45
CHRNA1P02708 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 AC098614.1-201ENST00000368528 745 ntBASIC17.83■□□□□ 0.44
CHRNA1P02708 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 SRD5A3P1-201ENST00000603021 949 ntBASIC17.83■□□□□ 0.44
CHRNA1P02708 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.83■□□□□ 0.44
CHRNA1P02708 AC004461.2-201ENST00000629517 803 ntBASIC17.83■□□□□ 0.44
CHRNA1P02708 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA1P02708 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA1P02708 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA1P02708 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA1P02708 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.83■□□□□ 0.44
CHRNA1P02708 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.83■□□□□ 0.44
CHRNA1P02708 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA1P02708 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHRNA1P02708 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHRNA1P02708 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA1P02708 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA1P02708 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.82■□□□□ 0.44
CHRNA1P02708 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA1P02708 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.82■□□□□ 0.44
CHRNA1P02708 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHRNA1P02708 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.82■□□□□ 0.44
CHRNA1P02708 AC087499.6-201ENST00000411576 835 ntBASIC17.82■□□□□ 0.44
CHRNA1P02708 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
CHRNA1P02708 AC093004.1-201ENST00000508850 424 ntBASIC17.82■□□□□ 0.44
CHRNA1P02708 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CHRNA1P02708 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHRNA1P02708 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms