Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 AC007967.2-201ENST00000432613 625 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 AL513480.1-201ENST00000451731 511 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 AL031432.2-201ENST00000566714 459 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 AL928711.1-201ENST00000570165 459 ntBASIC13.33□□□□□ -0.28
HLA-DRB1P01911 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-DRB1P01911 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AC140113.2-201ENST00000604370 208 ntBASIC13.32□□□□□ -0.28
HLA-DRB1P01911 AC023141.13-201ENST00000604991 943 ntBASIC13.32□□□□□ -0.28
HLA-DRB1P01911 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.32□□□□□ -0.28
HLA-DRB1P01911 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DRB1P01911 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DRB1P01911 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms