Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-AP01891 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-AP01891 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-AP01891 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HLA-AP01891 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-AP01891 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-AP01891 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-AP01891 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-AP01891 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-AP01891 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-AP01891 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 AC009336.1-201ENST00000608941 1553 ntBASIC14.04□□□□□ -0.16
HLA-AP01891 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-AP01891 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-AP01891 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HLA-AP01891 FAM8A6P-201ENST00000407496 1135 ntBASIC14.03□□□□□ -0.16
HLA-AP01891 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HLA-AP01891 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-AP01891 STK19B-204ENST00000512515 211 ntBASIC14.03□□□□□ -0.16
HLA-AP01891 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 VENTXP5-201ENST00000523979 775 ntBASIC14.03□□□□□ -0.16
HLA-AP01891 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 NTF6B-201ENST00000591913 560 ntBASIC14.03□□□□□ -0.16
HLA-AP01891 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HLA-AP01891 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
HLA-AP01891 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-AP01891 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-AP01891 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.03□□□□□ -0.16
HLA-AP01891 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 OR2I1P-210ENST00000642037 4691 ntBASIC14.03□□□□□ -0.16
HLA-AP01891 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-AP01891 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HLA-AP01891 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.03□□□□□ -0.16
HLA-AP01891 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HLA-AP01891 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HLA-AP01891 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-AP01891 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HLA-AP01891 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HLA-AP01891 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.02□□□□□ -0.16
HLA-AP01891 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
HLA-AP01891 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms