Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 AC005829.1-201ENST00000570002 483 ntBASIC12.79□□□□□ -0.36
TRBV12-3P01733 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MIR3687-2-201ENST00000577708 61 ntBASIC12.79□□□□□ -0.36
TRBV12-3P01733 MIR4469-201ENST00000583919 79 ntBASIC12.79□□□□□ -0.36
TRBV12-3P01733 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MIR3687-1-201ENST00000614492 61 ntBASIC12.79□□□□□ -0.36
TRBV12-3P01733 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRBV12-3P01733 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRBV12-3P01733 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PCGF3-213ENST00000620529 1899 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AL671277.1-201ENST00000429656 993 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 CEND1P1-201ENST00000451006 455 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 RARRES2P8-201ENST00000566335 367 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AL118508.1-201ENST00000613502 2345 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 WASH6P-202ENST00000359512 1437 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PCDHB19P-201ENST00000570871 2371 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 ELL2P1-201ENST00000413990 1906 ntBASIC12.78□□□□□ -0.36
TRBV12-3P01733 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRBV12-3P01733 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.78□□□□□ -0.36
TRBV12-3P01733 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRBV12-3P01733 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
TRBV12-3P01733 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV12-3P01733 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV12-3P01733 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV12-3P01733 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRBV12-3P01733 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV12-3P01733 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV12-3P01733 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV12-3P01733 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV12-3P01733 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.77□□□□□ -0.37
TRBV12-3P01733 ADH5P3-201ENST00000433842 1137 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms