Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL355306.1-201ENST00000415580 579 ntBASIC17.5■□□□□ 0.39
ZBED1O96006 AL671277.1-201ENST00000429656 993 ntBASIC17.5■□□□□ 0.39
ZBED1O96006 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.5■□□□□ 0.39
ZBED1O96006 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ZBED1O96006 GPALPP1-207ENST00000611650 899 ntBASIC17.5■□□□□ 0.39
ZBED1O96006 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ZBED1O96006 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZBED1O96006 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.5■□□□□ 0.39
ZBED1O96006 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ZBED1O96006 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 AC006538.1-201ENST00000567905 1585 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 PCDHB19P-201ENST00000570871 2371 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 AC004967.1-201ENST00000453589 447 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 HLA-J-202ENST00000469281 1241 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.49■□□□□ 0.39
ZBED1O96006 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
ZBED1O96006 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 FAM86C2P-203ENST00000528684 1004 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ZBED1O96006 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.49■□□□□ 0.39
ZBED1O96006 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 AC134684.3-201ENST00000641758 218 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 AL512652.2-201ENST00000625156 1716 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 AL391005.1-201ENST00000623953 2435 ntBASIC17.49■□□□□ 0.39
ZBED1O96006 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ZBED1O96006 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.49■□□□□ 0.39
ZBED1O96006 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.49■□□□□ 0.39
ZBED1O96006 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZBED1O96006 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
ZBED1O96006 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZBED1O96006 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZBED1O96006 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
ZBED1O96006 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ZBED1O96006 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZBED1O96006 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.48■□□□□ 0.39
ZBED1O96006 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.48■□□□□ 0.39
ZBED1O96006 ADH5P3-201ENST00000433842 1137 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms