Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.83■□□□□ 0.28
PMPCBO75439 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PMPCBO75439 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
PMPCBO75439 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMPCBO75439 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.83■□□□□ 0.28
PMPCBO75439 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.83■□□□□ 0.28
PMPCBO75439 AL513190.1-201ENST00000621254 727 ntBASIC16.83■□□□□ 0.28
PMPCBO75439 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMPCBO75439 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PMPCBO75439 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PMPCBO75439 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PMPCBO75439 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PMPCBO75439 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 PCGF3-213ENST00000620529 1899 ntBASIC16.82■□□□□ 0.28
PMPCBO75439 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PMPCBO75439 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PMPCBO75439 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.82■□□□□ 0.28
PMPCBO75439 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
PMPCBO75439 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.82■□□□□ 0.28
PMPCBO75439 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.82■□□□□ 0.28
PMPCBO75439 FAM197Y3-203ENST00000618346 717 ntBASIC16.82■□□□□ 0.28
PMPCBO75439 AC092865.6-201ENST00000642101 219 ntBASIC16.82■□□□□ 0.28
PMPCBO75439 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PMPCBO75439 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PMPCBO75439 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 TNRC18P3-201ENST00000441896 2691 ntBASIC16.82■□□□□ 0.28
PMPCBO75439 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PMPCBO75439 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.81■□□□□ 0.28
PMPCBO75439 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PMPCBO75439 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.81■□□□□ 0.28
PMPCBO75439 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.81■□□□□ 0.28
PMPCBO75439 AC021097.1-201ENST00000607902 574 ntBASIC16.81■□□□□ 0.28
PMPCBO75439 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms