Protein–RNA interactions for Protein: O75293

GADD45B, Growth arrest and DNA damage-inducible protein GADD45 beta, humanhuman

Predicted RBP Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45BO75293 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
GADD45BO75293 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GADD45BO75293 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.96■□□□□ 0.63
GADD45BO75293 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GADD45BO75293 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.95■□□□□ 0.62
GADD45BO75293 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.95■□□□□ 0.62
GADD45BO75293 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 AC107918.2-201ENST00000530817 355 ntBASIC18.95■□□□□ 0.62
GADD45BO75293 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.95■□□□□ 0.62
GADD45BO75293 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GADD45BO75293 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.95■□□□□ 0.62
GADD45BO75293 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
GADD45BO75293 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
GADD45BO75293 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 AC091167.2-201ENST00000579581 588 ntBASIC18.94■□□□□ 0.62
GADD45BO75293 AL589182.2-201ENST00000619332 1049 ntBASIC18.94■□□□□ 0.62
GADD45BO75293 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GADD45BO75293 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.94■□□□□ 0.62
GADD45BO75293 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.94■□□□□ 0.62
GADD45BO75293 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GADD45BO75293 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GADD45BO75293 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GADD45BO75293 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.93■□□□□ 0.62
GADD45BO75293 KRT18P21-201ENST00000515767 1272 ntBASIC18.93■□□□□ 0.62
GADD45BO75293 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 AL732292.2-201ENST00000609649 430 ntBASIC18.93■□□□□ 0.62
GADD45BO75293 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
GADD45BO75293 PI4KAP1-204ENST00000612579 1703 ntBASIC18.93■□□□□ 0.62
GADD45BO75293 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.93■□□□□ 0.62
GADD45BO75293 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
GADD45BO75293 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GADD45BO75293 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GADD45BO75293 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GADD45BO75293 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GADD45BO75293 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.92■□□□□ 0.62
GADD45BO75293 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.92■□□□□ 0.62
GADD45BO75293 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GADD45BO75293 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GADD45BO75293 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
GADD45BO75293 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms