Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 AC093520.2-201ENST00000561830 333 ntBASIC16.74■□□□□ 0.27
PRAMEF11O60813 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 FOXO1B-201ENST00000504678 1527 ntBASIC16.74■□□□□ 0.27
PRAMEF11O60813 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEF11O60813 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEF11O60813 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 SNHG9-202ENST00000564014 471 ntBASIC16.73■□□□□ 0.27
PRAMEF11O60813 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 AL596442.2-201ENST00000610240 980 ntBASIC16.73■□□□□ 0.27
PRAMEF11O60813 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 AC079781.4-201ENST00000641908 219 ntBASIC16.73■□□□□ 0.27
PRAMEF11O60813 UXT-AS1-201ENST00000590504 1525 ntBASIC16.73■□□□□ 0.27
PRAMEF11O60813 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRAMEF11O60813 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.73■□□□□ 0.27
PRAMEF11O60813 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 RPS8P6-201ENST00000426177 609 ntBASIC16.72■□□□□ 0.27
PRAMEF11O60813 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.72■□□□□ 0.27
PRAMEF11O60813 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF11O60813 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF11O60813 U82695.1-201ENST00000635752 1889 ntBASIC16.71■□□□□ 0.27
PRAMEF11O60813 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms