Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RIPK2O43353 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.83■□□□□ 0.28
RIPK2O43353 AP002383.4-201ENST00000442518 975 ntBASIC16.83■□□□□ 0.28
RIPK2O43353 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RIPK2O43353 SLC22A20-204ENST00000530038 1673 ntBASIC16.83■□□□□ 0.28
RIPK2O43353 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.83■□□□□ 0.28
RIPK2O43353 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.83■□□□□ 0.28
RIPK2O43353 AC005332.1-201ENST00000577698 1310 ntBASIC16.83■□□□□ 0.28
RIPK2O43353 CYP2A7P1-201ENST00000595391 815 ntBASIC16.83■□□□□ 0.28
RIPK2O43353 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.83■□□□□ 0.28
RIPK2O43353 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RIPK2O43353 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 LINC02228-204ENST00000642115 2962 ntBASIC16.83■□□□□ 0.28
RIPK2O43353 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 BX005266.1-201ENST00000473402 457 ntBASIC16.82■□□□□ 0.28
RIPK2O43353 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.82■□□□□ 0.28
RIPK2O43353 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 AC023157.3-201ENST00000619086 2088 ntBASIC16.82■□□□□ 0.28
RIPK2O43353 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.82■□□□□ 0.28
RIPK2O43353 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIPK2O43353 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RIPK2O43353 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.81■□□□□ 0.28
RIPK2O43353 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIPK2O43353 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 PMS2P1-201ENST00000431037 1228 ntBASIC16.81■□□□□ 0.28
RIPK2O43353 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 AC087163.2-201ENST00000457299 853 ntBASIC16.81■□□□□ 0.28
RIPK2O43353 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.81■□□□□ 0.28
RIPK2O43353 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.81■□□□□ 0.28
RIPK2O43353 AP002414.4-201ENST00000589764 1148 ntBASIC16.81■□□□□ 0.28
RIPK2O43353 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.81■□□□□ 0.28
RIPK2O43353 AL121956.5-201ENST00000625261 221 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms