Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 AC142381.1-201ENST00000426099 345 ntBASIC20.49■□□□□ 0.87
SRGAP3O43295 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.49■□□□□ 0.87
SRGAP3O43295 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.49■□□□□ 0.87
SRGAP3O43295 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.49■□□□□ 0.87
SRGAP3O43295 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.49■□□□□ 0.87
SRGAP3O43295 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 SLC25A39P2-201ENST00000537614 270 ntBASIC20.49■□□□□ 0.87
SRGAP3O43295 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.49■□□□□ 0.87
SRGAP3O43295 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.49■□□□□ 0.87
SRGAP3O43295 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
SRGAP3O43295 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SRGAP3O43295 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.49■□□□□ 0.87
SRGAP3O43295 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.49■□□□□ 0.87
SRGAP3O43295 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRGAP3O43295 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SRGAP3O43295 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.48■□□□□ 0.87
SRGAP3O43295 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.48■□□□□ 0.87
SRGAP3O43295 KRT18P32-201ENST00000424695 1287 ntBASIC20.48■□□□□ 0.87
SRGAP3O43295 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.48■□□□□ 0.87
SRGAP3O43295 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SRGAP3O43295 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SRGAP3O43295 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SRGAP3O43295 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRGAP3O43295 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC005622.1-201ENST00000636801 1703 ntBASIC20.47■□□□□ 0.87
SRGAP3O43295 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 AL662844.4-201ENST00000606367 2838 ntBASIC20.47■□□□□ 0.87
SRGAP3O43295 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC092183.1-201ENST00000469884 875 ntBASIC20.47■□□□□ 0.87
SRGAP3O43295 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC009093.7-201ENST00000623853 1223 ntBASIC20.47■□□□□ 0.87
SRGAP3O43295 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SRGAP3O43295 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
SRGAP3O43295 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRGAP3O43295 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SRGAP3O43295 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.46■□□□□ 0.87
SRGAP3O43295 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms