Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.01□□□□□ -0.17
TSPAN4O14817 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
TSPAN4O14817 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TSPAN4O14817 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 AP000593.1-201ENST00000393668 712 ntBASIC14□□□□□ -0.17
TSPAN4O14817 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14□□□□□ -0.17
TSPAN4O14817 COX11P1-201ENST00000489116 835 ntBASIC14□□□□□ -0.17
TSPAN4O14817 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14□□□□□ -0.17
TSPAN4O14817 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14□□□□□ -0.17
TSPAN4O14817 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 AC112497.1-201ENST00000624824 639 ntBASIC14□□□□□ -0.17
TSPAN4O14817 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TSPAN4O14817 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TSPAN4O14817 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14□□□□□ -0.17
TSPAN4O14817 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TSPAN4O14817 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.99□□□□□ -0.17
TSPAN4O14817 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.99□□□□□ -0.17
TSPAN4O14817 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.99□□□□□ -0.17
TSPAN4O14817 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TSPAN4O14817 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TSPAN4O14817 RCN1P1-201ENST00000400413 996 ntBASIC13.99□□□□□ -0.17
TSPAN4O14817 KRT18P23-201ENST00000435622 1283 ntBASIC13.99□□□□□ -0.17
TSPAN4O14817 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.99□□□□□ -0.17
TSPAN4O14817 KRT18P57-201ENST00000443599 1254 ntBASIC13.99□□□□□ -0.17
TSPAN4O14817 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.99□□□□□ -0.17
TSPAN4O14817 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.99□□□□□ -0.17
TSPAN4O14817 AC140113.3-201ENST00000605663 199 ntBASIC13.99□□□□□ -0.17
TSPAN4O14817 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TSPAN4O14817 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TSPAN4O14817 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.99□□□□□ -0.17
TSPAN4O14817 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TSPAN4O14817 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms