Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 HTR7P1-201ENST00000538670 1336 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 QDPR-206ENST00000508623 601 ntTSL 3 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 AL162412.1-201ENST00000567129 965 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 HSD17B1P1-201ENST00000590052 955 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 AL589743.5-201ENST00000616611 1050 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC00304-203ENST00000565008 1864 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CICP17-201ENST00000418553 2377 ntBASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 APC2-203ENST00000535453 11656 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
CHKB-CPT1BH3BT56 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 SP100-208ENST00000427101 1922 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
CHKB-CPT1BH3BT56 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms