Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 NTF6B-201ENST00000591913 560 ntBASIC14.19□□□□□ -0.14
TMEM235A6NFC5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM235A6NFC5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 MINOS1P3-201ENST00000457048 203 ntBASIC14.18□□□□□ -0.14
TMEM235A6NFC5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.18□□□□□ -0.14
TMEM235A6NFC5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 AP000867.4-201ENST00000641616 219 ntBASIC14.18□□□□□ -0.14
TMEM235A6NFC5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM235A6NFC5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 RCN1P2-201ENST00000398357 915 ntBASIC14.17□□□□□ -0.14
TMEM235A6NFC5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 CHCHD2P8-201ENST00000429873 447 ntBASIC14.17□□□□□ -0.14
TMEM235A6NFC5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM235A6NFC5 AC022616.7-201ENST00000525383 220 ntBASIC14.17□□□□□ -0.14
TMEM235A6NFC5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms