Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 RNF152P1-201ENST00000397754 604 ntBASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TCRBV3S1A0A5B6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AC008677.1-201ENST00000519230 1561 ntBASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRBV3S1A0A5B6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRBV3S1A0A5B6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms