Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 TPSP2-201ENST00000561760 610 ntBASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 AC002310.6-201ENST00000624451 1377 ntBASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 AC068587.6-202ENST00000641839 5619 ntBASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV5A0A0B4J249 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AC005332.1-201ENST00000577698 1310 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 SIGLEC16-201ENST00000599858 1437 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AC073347.1-201ENST00000421633 2643 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 IGHV3-47-201ENST00000425060 335 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 LINC00265-3P-201ENST00000447588 903 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TSSC2-201ENST00000450217 709 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 RN7SL850P-201ENST00000579959 291 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 LINC01023-201ENST00000606054 436 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 AL353135.1-201ENST00000606729 504 ntBASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRAV5A0A0B4J249 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms