Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 TERF1P3-201ENST00000505638 1227 ntBASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SSX2IPQ9Y2D8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 FAM207CP-201ENST00000443486 507 ntBASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SSX2IPQ9Y2D8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 FO538757.1-201ENST00000623083 1397 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 AL138688.1-201ENST00000624851 1594 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 TREML5P-201ENST00000421694 576 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 TSPY16P-201ENST00000449843 468 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 KRT18P34-201ENST00000488218 1270 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 AC016027.1-202ENST00000607927 1699 ntBASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.8■□□□□ 0.44
SSX2IPQ9Y2D8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SSX2IPQ9Y2D8 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms