Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AC005412.3-201ENST00000580309 715 ntBASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 AC006504.4-201ENST00000592118 1568 ntBASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 AC010654.1-201ENST00000615722 808 ntBASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 TOP3BP1-201ENST00000420768 1380 ntBASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC00474Q9P2X8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 KRT8P49-201ENST00000604166 1432 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC073621.1-201ENST00000392730 636 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC092910.1-201ENST00000482027 1129 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC079776.4-201ENST00000511039 504 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC091167.2-201ENST00000579581 588 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 HNRNPRP1-201ENST00000453465 1695 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 FRMD8P1-201ENST00000440433 1524 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC138969.2-201ENST00000532739 9932 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 ZNF259P1-201ENST00000407656 1365 ntBASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC10.87□□□□□ -0.67
LINC00474Q9P2X8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms