Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 AC008667.4-201ENST00000607370 168 ntBASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 MIR1199-201ENST00000621445 119 ntBASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 AL162727.3-201ENST00000635661 2787 ntBASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRTM1Q9HBL6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 RNPS1P1-201ENST00000507437 918 ntBASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.96■□□□□ 0.15
LRTM1Q9HBL6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.96■□□□□ 0.14
LRTM1Q9HBL6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRTM1Q9HBL6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.96■□□□□ 0.14
LRTM1Q9HBL6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.96■□□□□ 0.14
LRTM1Q9HBL6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 IGHV3-65-201ENST00000523210 341 ntBASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 AC008735.5-201ENST00000623544 497 ntBASIC15.95■□□□□ 0.14
LRTM1Q9HBL6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms