Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 GGT3P-204ENST00000453783 1664 ntBASIC17.8■□□□□ 0.44
NXF3Q9H4D5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NXF3Q9H4D5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AC027369.6-201ENST00000525520 931 ntBASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 AC106886.4-201ENST00000623557 2502 ntBASIC17.79■□□□□ 0.44
NXF3Q9H4D5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NXF3Q9H4D5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 MTND6P24-201ENST00000440466 518 ntBASIC17.78■□□□□ 0.44
NXF3Q9H4D5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 AC100757.3-201ENST00000622361 1406 ntBASIC17.78■□□□□ 0.44
NXF3Q9H4D5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NXF3Q9H4D5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AL035633.1-201ENST00000406139 838 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms